DEIso
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DEIso
: A Database for Differentially Expressed Isoforms and Genes in Human Cancer
Collects 2 human cancer RNA-Seq data from Genomic Data Commons Data Portal (GDC)
Aligns the RNA-Seq data to genome (consisting of 56891 mRNA transcripts and 26380 genes)
Provides differentially expressed transcripts and genes in human cancer
Users can find out differentially expressed transcripts and genes in two condinion (e.g. normal vs colon cancer stage i)
Users can analyze whether the isoform and gene expression affects patient survival time
Update History
2018 May: Release DEIso.
2017 Nov.: Download colon cancer and rectum cancer RNA-Seq data from GDC.
2017 Sept.: Start DEIso project.
Last Updated: May 31, 2018.